Physiological pre-breeding crossing block dataset

The historic crossing block (HCB) is a collection of all the parents of spring wheat pre-breeding crossing block that include landraces, synthetics, synthetic derivatives, elite lines, high biomass lines, lines with rust resistance, and some varieties. Every year, to incorporate novel alleles into elite back grounds several strategic crosses-source× sink, landrace × elite, synthetic × elite-are made based on the physiological breeding approach (Reynolds et al. 2017b). The HCB is comprised of three panels: germplasm used for the crosses for yield potential (CB-YP), drought (CB-D), and heat stress (CB-H). The number of lines in each panel increased from 128 to 311 in CB-YP, from 123 to 219 in CB-D, and from 80 to 195 in CB-H during 2012-2017. A total of 119,144 SNP markers were identified on the germplasm. After quality control (removing markers with missing data > 30%, and minor allele frequency < 5%), 13135, 11717, and 14441 polymorphic SNPs for CB-YP, CB-D, and CB-H, respectively were used for further analysis.

Data and Resources

Additional Info

Field Value
Author Sukumaran, Sivakumar
Maintainer CIMMYT Research Data & Software Repository Network
Last Updated January 20, 2025, 15:54 (UTC)
Created January 20, 2025, 15:54 (UTC)
contributor Rivera, Carolina
creator Sukumaran, Sivakumar
date 2020-09-03T00:00:00
harvest_object_id 237b3d41-6fb4-42e4-9340-8621f172f006
harvest_source_id a58b0729-e941-4389-816d-5823f01c0d28
harvest_source_title CIMMYT Research Data
identifier https://hdl.handle.net/11529/10548509
language English
metadata_modified 2024-10-26T07:00:04
set_spec data_cimmyt