A hierarchical bayesian estimation model for multi-environment plant breeding trials in successive years

In agriculture and plant breeding, multi-environment trials over multiple years are conducted to evaluate and predict genotypic performance under different environmental conditions, and to analyze, study, and interpret genotype × environment interaction (G×E). In this study, we propose a hierarchical Bayesian formulation of a linear-bilinear model, where the conditional conjugate prior for the bilinear (multiplicative) G×E interaction term is the matrix von Mises-Fisher distribution (with environments and sites defined as synonymous). A hierarchical normal structure is assumed for linear effects of genotypes and sites, and priors for precision parameters are assumed to follow gamma distributions. Bivariate Highest Posterior Density (HPD) regions for the posterior multiplicative components of the interaction are shown within the usual biplots. Simulated and real maize breeding multi-site data sets were analyzed. Results showed that the proposed model facilitates identifying groups of genotypes and sites that cause G×E across years and within years, since the hierarchical Bayesian structure allows using plant breeding data from different years by borrowing information among them. This model offers the researcher valuable information about the G×E interaction patterns not only for each one-year period of the breeding trials but also for the general process that originates the response across these periods.

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Additional Info

Field Value
Author Jarquín, Diego, Pérez-Elizalde, Sergio, Burgueño, Juan, Crossa, Jose
Maintainer CIMMYT Research Data & Software Repository Network
Last Updated January 20, 2025, 15:10 (UTC)
Created January 20, 2025, 15:10 (UTC)
creator Jarquín, Diego
date 2015-10-26T00:00:00
harvest_object_id fdfcc625-1d52-493f-873e-3203663f19eb
harvest_source_id a58b0729-e941-4389-816d-5823f01c0d28
harvest_source_title CIMMYT Research Data
identifier https://hdl.handle.net/11529/10463
language English
metadata_modified 2024-10-26T07:00:02
set_spec cimmytdatadvn