Application of a genomics selection index to real and simulated data

We apply a Genomic Selection Index (GSI) to simulated and real data sets with four traits and numerically we compared its efficiency with that of the phenotypic selection index (PSI) using the ratio of the GSI response over the PSI response. In addition, we used two additional criteria to compare the GSI vs PSI efficiency: the ratio of the average of the top 10% of the predicted values of the net genetic merit from one to the next selection cycle for PSI and GSI and the Technow inequality. Results from the simulated data were confirmed by the real data, indicating that GSI was more efficient than PSI in terms of time and that the means of the top 10% of the net genetic merit predicted by GSI were higher than that predicted by PSI. Thus, we concluded that the proposed GSI is an efficient choice when the purpose of a breeding program is to select genotypes using genomic selection.

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Author Cerón-Rojas, J. Jesús, Crossa, Jose, Arief, Vivi N., Basford, Kaye, Rutkoski, Jessica, Jarquín, Diego, Alvarado, Gregorio, Beyene, Yoseph, Semagn, Kassa, DeLacy, Ian
Maintainer CIMMYT Research Data & Software Repository Network
Last Updated January 20, 2025, 15:04 (UTC)
Created January 20, 2025, 15:04 (UTC)
creator Cerón-Rojas, J. Jesús
date 2015-06-04T00:00:00
harvest_object_id 6b8e108a-6188-4723-942d-0c22824a563d
harvest_source_id a58b0729-e941-4389-816d-5823f01c0d28
harvest_source_title CIMMYT Research Data
identifier https://hdl.handle.net/11529/10199
language English
metadata_modified 2024-10-26T07:00:02
set_spec cimmytdatadvn